DFT study on some polythiophenes containing benzo[d]thiazole and benzo[d]oxazole: structure and band gap.

The content of this paper focuses/shed light on the effects of X (X = S in P1 and X = O in P2) in C11H7NSX and R (R = H in P3, R = OCH3 in P4, and R = Cl in P5) in C18H9ON2S2-R on structural features and band gaps of the polythiophenes containing benzo[d]thiazole and benzo[d]oxazole by the Density Function Theory (DFT) method/calculation. The structural features including the electronic structure lattice constant (a), shape, total energy (Etot) per cell, and link length (r), are measured via band gap (Eg) prediction with the package of country density (PDOS) and total country density (DOS) of material studio software. The results obtained showed that the link angle and the link length between atoms were not changed significantly while the Etot was decreased from Etot = - 1904 eV (in P1) to Etot = - 2548 eV (in P2) when replacing O with S; and the Etot of P3 was decreased from Etot = - 3348 eV (in P3) when replacing OCH3, Cl on H of P3 corresponding to Etot = - 3575 eV (P4), - 4264 eV (P5). Similarly, when replacing O in P1 with - S to form P2, the Eg of P1 was dropped from Eg = 0.621 eV to Eg = 0.239 eV for P2. The Eg of P3, P4, and P5 is Eg = 0.006 eV, 0.064 eV, and 0.0645 eV, respectively. When a benzo[d]thiazole was added in P1 (changing into P3), the Eg was extremely strongly decreased, nearly 100 times (from Eg = 0.621 eV to Eg = 0.006 eV). The obtained results serve as a basis for future experimental work and used to fabricate smart electronic device.

Effect of doped H, Br, Cu, Kr, Ge, As and Fe on structural features and bandgap of poly C13H8OS-X: a DFT calculation.

Structural features such as the shape, the lattice constant, the bond length, the total energy per cell, and the energy bandgap (Eg) of C13H8OS-X are studied by the calculating Partial Density Of States (PDOS), and DOS package of the Material Studio (MS) software. Calculations show that the bond length and the bond angle between atoms insignificant change as 1.316 Å to 1.514 Å for C-C, 1.211 Å for C-O, 1.077 Å to 1.105 Å for C-H; bond angle of round one changes from 118.883° to 121.107° for C-C-C, from 117.199° to 122.635° for H-C-C, from 119.554° to 123.147° for C-C-O and from 109.956° to 117.537° for C-C-H. When C13H8OS-X doped in the order of -Br, -Cu, -Kr, -Ge, -As, and -Fe then bond lengths, bond angles between atoms have a nearly constant value. Particularly for links C-X, there is a huge change in value, respectively 1.876, 1.909, 10.675, 2.025, 2.016, 2.014 Å; the total energy change from Etot = -121,794 eV to Etot = -202,859 eV, and the energy band gap decreases from Eg = 2.001 eV to Eg = 0.915 eV. The obtained results are useful and serve as a basis for future experimental research.

Influence of heating rate, temperature, pressure on the structure, and phase transition of amorphous Ni material: A molecular dynamics study.

The present article is aimed to investigate influence of the heating rate, temperature (T), pressure (P) on the structure and phase transition of amorphous Ni material with heating rate 2 × 105, 2 × 106 and 2 × 107 K/s at T = 300 K; T = 300, 400, 500, 600, 700, 800, 900 and 1000 K at heating rate 2 × 106 K/s; T = 300, 621 and 900 K at P = 1, 2, 3, 4 and 5 GPa by molecular dynamics simulation method with Sutton-Chen embedded potential and periodic boundary conditions. The structure of amorphous Ni material determined through the radial distribution function, the total energy, the size and the average coordination number. The phase transition and the glass transition temperature determined through the relationship between the total energy and temperature. The result shows that when the heating rate increases, the first peak's position for the radial distribution function is 2.45 Å and a constant, the first peak's height, the total energy and the size increase, the average coordination number decreases from 13 to 12. When temperature increases from 300 to 1000 K at P = 0 GPa, the position decreases from 2.45 Å to 2.40 Å, the average coordination number is 13 and a constant, glass transition temperature is 631 K, the total energy increases, the size increases and happens the phase transition from the amorphous state to the liquid state. When pressure increases from 0 GPa to 5 GPa at T = 300, 621 and 900 K, the position decreases, the height increases, the total energy increases, the size decreases, the average coordination number decreases from 13 to 12, that shows with amorphous Ni material when increasing heating rate, T, P lead to structural change, phase transition of materials is significant.

Ab Initio Calculations on the Structural and Electronic Properties of AgAu Alloys.

In our paper, we study the effects of pseudopotential and concentration of Au doping (0, 25, 50, 75, 100%) on the geometric structure and electronic structures of AgAu alloys. For this purpose, we use ab initio quantum calculations in the Material Studios software. The geometric structures of materials are confirmed through the lattice constant, crystal structure, and total energy of the unit cells (E tot). Electronic structures of the materials are confirmed by band gap (Eg), projected density of states (PDOS), and total density of states (DOS). The obtained results show that the pseudopotential and concentration of Au doping on AgAu alloys play an important role in the origin of the physical properties of AgAu alloys.

DFT Prediction of Factors Affecting the Structural Characteristics, the Transition Temperature and the Electronic Density of Some New Conjugated Polymers.

Conjugated polymers are promising materials for various cutting-edge technologies, especially for organic conducting materials and in the energy field. In this work, we have synthesized a new conjugated polymer and investigated the effect of distance between bond layers, side-chain functional groups (H, Br, OH, OCH3 and OC2H5) on structural characteristics, phase transition temperature (T), and electrical structure of C13H8OS using Density Functional Theory (DFT). The structural characteristics were determined by the shape, network constant (a, b and c), bond length (C-C, C-H, C-O, C-S, C-Br and O-H), phase transition temperatures, and the total energy (Etot) on a base cell. Our finding shows that the increase of layer thickness (h) of C13H8OS-H has a negligible effect on the transition temperature, while the energy bandgap (Eg) increases from 1.646 eV to 1.675 eV. The calculation of bond length with different side chain groups was carried out for which C13H8OS-H has C-H = 1.09 Å; C13H8OS-Br has C-Br = 1.93 Å; C13H8OS-OH has C-O = 1.36 Å, O-H = 0.78 Å; C13H8OS-OCH3 has C-O = 1.44 Å, O-H =1.10 Å; C13H8OS-OC2H5 has C-O = 1.45 Å, C-C = 1.51Å, C-H = 1.10 Å. The transition temperature (T) for C13H8OS-H was 500 K < T < 562 K; C13H8OS-Br was 442 K < T < 512 K; C13H8OS-OH was 487 K < T < 543 K; C13H8OS-OCH3 was 492 K < T < 558 K; and C13H8OS-OC2H5 was 492 K < T < 572 K. The energy bandgap (Eg) of Br is of Eg = 1.621 eV, the doping of side chain groups H, OH, OCH3, and OC2H5, leads to an increase of Eg from 1.621 eV to 1.646, 1.697, 1.920, and 2.04 eV, respectively.

Simulation on the Factors Affecting the Crystallization Process of FeNi Alloy by Molecular Dynamics.

This paper investigates the crystallization process of FeNi alloys with different impurity concentrations of Ni(x) [x = 10% (Fe90Ni10), 20% (Fe80Ni20), 30% (Fe70Ni30), 40% (Fe60Ni40), and 50% (Fe50Ni50)] at temperature (T) = 300 K and Fe70Ni30 at heating rates of 4 × 1012, 4 × 1013, and 4 × 1014 K/s at different temperatures, T = 300, 400, 500, 600, 700, 900, 1100, and 1300 K. Molecular dynamics models with the Sutton-Chen embedded interaction potential and recirculating boundary conditions are used to calculate the molecular parameters of alloys, such as radial distribution function, total energy of the system (E tot), size (l), and crystallization temperature (through the relationship between E tot and T). The common neighborhood analysis method is used to confirm the theoretical results of crystallization for Fe-Fe, Fe-Ni, and Ni-Ni. The annealing process did not have an effect on the crystallization process of FeNi alloys. The effect of Ni content, heating rate, and annealing time on structural unit numbers, such as face-centered cubic, hexagonal close-packed, blocked cubic center, and amorphous, and the crystallization process of FeNi alloys is also investigated.

Temporal abstraction and data mining with visualization of laboratory data.

To analyze the laboratory data by data mining, user-centered universal tools have not been available in medicine. We analyzed 1,565,877 laboratory data of 771 patients with viral hepatitis in order to find the difference of the temporal changes in laboratory test data between Hepatitis B and Hepatitis C by the combination of temporal abstraction and data mining. The data for one patient is temporal for more than 5 years. After pretreatment the data was converted to abstract patterns and then selected into sets of data combination and rules to identify Hepatitis B or C by D2MS and LUPC which were originally produced by ourselves. Not only data pattern, but also temporal relations were considered as a part of the rules. In the course of evaluating the results by domain experts, even though there were not so remarkable hypotheses, visualization tools made it easier for them to understand the relations of the complicated rules.